Project data management/OA-ICC: Difference between revisions

From PANGAEA Wiki
Jump to navigation Jump to search
No edit summary
No edit summary
Line 67: Line 67:
* Add the (paper's) abstract to the parent/single dataset and set the reference relation ''Supplement to''; definition of [http://wiki.pangaea.de/wiki/Supplement supplement]  
* Add the (paper's) abstract to the parent/single dataset and set the reference relation ''Supplement to''; definition of [http://wiki.pangaea.de/wiki/Supplement supplement]  
* Set the project [http://www.iaea.org/monaco/page.php?page=2260 OA-ICC] (Project ID 4173)
* Set the project [http://www.iaea.org/monaco/page.php?page=2260 OA-ICC] (Project ID 4173)
* Create a reference for the external published doi (e.g., [http://www.bodc.ac.uk BODC]) (doi and full citation text), and link this reference as ''original version'' in the Pangaea dataset.  
* Create a reference for the external published doi (e.g. [hht://dx.doi.org/10.5285/a931a96d-f08d-4e7d-af30-866f5e3e8fd8 Hennige et al., 2012 BODC]) (doi and full citation text), and link this reference as ''original version'' in the Pangaea dataset.  


Example: Hennige et al., 2013 (http://doi.pangaea.de/10.1594/PANGAEA.820339).
Example: Hennige et al., 2013 (http://doi.pangaea.de/10.1594/PANGAEA.820339).

Revision as of 2013-10-17T11:32:53

This page is under construction (2013-10-16)

Seawater carbonate chemistry with R (seacarb)

4D import - Config tab

Import measured and seacarb calculated sewater carbonate chemistry in one dataset

  • PI of original data/measured data = author of paper or the person who provided the original data
  • PI of seacarb calculated values = OA-ICC Data Curator
  • Method for seacarb calculation = Calculated using seacarb after Nisumaa et al. (2010) (Method ID 6426)
  • Refer to the seacarb citation (Reference ID 60864), set relation to Further details






4D import - Details tab
  • Add the date of seacarb calculation as dataset comment. Date must be provided in ISO-format (e.g. 2013-10-16)
  • Give the short explanation of seacarb calculation into the dataset comment: coming up soon, will be written by J.-P. Gattuso and Y. Yang

Example: Edmunds, 2012 doi:10.1594/PANGAEA.820070






Examples of data archiving

1) Data not yet archived

  • Import all (georeferenced) data, combine measured seawater chemistry with seawater carbonate chemistry calculation (seacarb).
  • If more than one dataset is archived, create a Parent.
  • Add the (paper's) abstract to the parent/single dataset and set the reference relation Supplement to; definition of supplement
  • Set the project OA-ICC (Project ID 4173) in the Supplement to data set, childs do not have a project.

Example: Edmunds et al., 2012 doi:10.1594/PANGAEA.820323



2) Data previously published in another database with URI (e.g. BCO-DMO):

Reference URI
  • Import measured seawater chemistry combined with seawater carbonate chemistry calculation (seacarb).
  • Mirroring also all other (georeferenced) data.
  • If more than one dataset is archived, create a Parent.
  • Add the (paper's) abstract to the parent/single dataset and set the reference relation Supplement to; definition of supplement
  • Set the project OA-ICC (Project ID 4173) in the Supplement to data set, childs do not have a project.
  • Create a reference for the external database link (URI and title, nothing else), and link this reference to all datasets, relation Other version.

Example: Comeau et al., 2012 (http://doi.pangaea.de/10.1594/PANGAEA.820164).



3) Data previously published in another database with DOI (e.g. BODC):

Reference DOI
  • Import measured seawater chemistry combined with seawater carbonate chemistry calculation (seacarb).
  • Do not archive the other data.
  • Add the (paper's) abstract to the parent/single dataset and set the reference relation Supplement to; definition of supplement
  • Set the project OA-ICC (Project ID 4173)
  • Create a reference for the external published doi (e.g. [hht://dx.doi.org/10.5285/a931a96d-f08d-4e7d-af30-866f5e3e8fd8 Hennige et al., 2012 BODC]) (doi and full citation text), and link this reference as original version in the Pangaea dataset.

Example: Hennige et al., 2013 (http://doi.pangaea.de/10.1594/PANGAEA.820339).



4) Data previously published in Panagea

4D import - References
  • Create a table with measured seawater chemistry and the carbonate chemistry calculation (seacarb). Import this table.
  • References of this dataset:
    • Paper citation, relation Related to
    • Original Pangaea parent dataset or a single data set which is a supplement to an article, relation Related to
    • Original measured seawater carbonate chemistry dataset, relation Original version
  • No abstract is added.
  • Set the project OA-ICC (Project ID 4173)

Example: Schalkhausser et al., 2013 (http://doi.pangaea.de/10.1594/PANGAEA.820432).


4D import - References
  • Update original measured seawater carbonate chemistry dataset: link to the new carbonate chemistry calculation version as Further detail and with the comment Carbonate chemistry recalculation by seacarb

see Schalkhausser et al., 2013 (http://doi.pangaea.de/10.1594/PANGAEA.789153).